BMC PLANT BIOLOGY

Comparative analyses of DNA repeats and identification of a novel Fesreba centromeric element in fescues and ryegrasses

Zwyrtková, J., Němečková, A., Čížková, J., Holušová, K., Kapustová, V., Svačina, R., Kopecký, D., Till, B.J., Doležel, J., Hřibová, E.
BMC PLANT BIOLOGY 20 : 280 , 2020
Klíčová slova: Festuca, Lolium, Illumina sequencing, Repetitive DNA, Centromere organization

Variation in plastid genomes in the gynodioecious species Silene vulgaris

Krüger M., Abeyawardana O.A.J., Juříček M., Krüger C., Štorchová H.
BMC PLANT BIOLOGY 19 : 568 , 2019
Klíčová slova: Plastid genome, Silene vulgaris, transcriptome, cytoplasmic male sterility, RNA editing

Repetitive somatic embryogenesis induced cytological and proteomic changes in embryogenic lines of Pseudotsuga menziesii [Mirb.]

Gautier F., Eliášová K., Leplé J.-C., Vondráková Z., Lomenech A.-M., Le Metté C., Label P., Costa G., Trontin J.-F., Teyssier C., Lelu-Walter M.-A.
BMC PLANT BIOLOGY 18 : 164 , 2018
Klíčová slova: Pseudotsuga, somatic embryogenesis, proteomic changes, Douglas-fir, embryogenic potential, proliferation,

High-throughput physical map anchoring via BAC-pool sequencing

Cviková, K., Cattonaro, F., Alaux, M., Stein, N., Mayer, K.F., Doležel, J., Bartoš, J.
BMC PLANT BIOLOGY 15 : 99 , 2015
Klíčová slova: Physical map, Contig anchoring, Next generation sequencing

Tomato (Solanum lycopersicum L.) SlIPT3 and SlIPT4 isopentenyltransferases mediate salt stress response in tomato

Žižková E., Dobrev P.I., Muhovski Y., Hošek P., Hoyerová K., Haisel D., Procházková D., Lutts S., Motyka V., Hichri I.
BMC PLANT BIOLOGY 15 : 85 , 2015
Klíčová slova: Cytokinin, isopentenyltransferase, salt stress, SlIPT3, SlIPT4, tomato

The transcriptome of Utricularia vulgaris, a rootless plant with minimalist genome, reveals extreme alternative splicing and only moderate sequence similarity with Utricularia gibba

Barta J., Stone J.D., Pech J., Sirová D., Adamec L., Campbell M.A., Štorchová H.*
BMC PLANT BIOLOGY 15 : 78 , 2015
Klíčová slova: Transcriptome, root-associated genes, alternative splicing, Utricularia vulgaris

Major haplotype divergence including multiple germin-like protein genes, at the wheat Sr2 adult plant stem rust resistance locus

Mago, R., Tabe, L., Vautrin, S., Šimková, H., Kubaláková, M., Upadhyaya, N., Berges, H., Kong, X., Breen, J., Doležel, J., Appels, R., Ellis, J.G., Spielmeyer, W.
BMC PLANT BIOLOGY 14 : 379 , 2014
Klíčová slova: Adult plant resistance (APR), Map-based cloning, Sr2, Germin-like proteins (GLPs), Wheat stem rust, Puccinia graminis, Physical mapping, Gene expression

Single-Cell-Based System to monitor carrier driven cellular auxin homeostasis.

Barbez E., Laňková M., Pařezová M., Rolčík J., Maizel A., Zažímalová E., Petrášek J., Friml J., Kleine-Vehn J.
BMC PLANT BIOLOGY 13:20 : , 2013
Klíčová slova: Auxin homeostasis, DR5, Auxin carrier, Auxin transport

Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat

Bartoš, J., Vlček, Č., Choulet, F., Džunková, M., Cviková, K., Šafář, J., Šimková, H., Pačes, J., Strnad, H., Sourdille, P., Bergés, H., Cattonaro, F., Feuillet, C., Doležel, J.
BMC PLANT BIOLOGY 12 : 155 , 2012
Klíčová slova: Wheat, BAC sequencing, Homoeologous genomes, Gene duplication, Non-collinear genes, Allopolyploidy

Chromosome arm-specific BAC end sequences permit comparative analysis of homoeologous chromosomes and genomes of polyploid wheat

Sehgal, S.K., Li, W., Rabinowicz, P.D., Chan, A., Šimková, H., Doležel, J., Gill, B.S.
BMC PLANT BIOLOGY 12 : 64 , 2012
Klíčová slova: